U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC4344141 protein HUA2-LIKE 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344141, updated on 12-Jul-2024

    Summary

    Gene symbol
    LOC4344141
    Gene description
    protein HUA2-LIKE 2
    Locus tag
    OSNPB_070655500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LOC4344141 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (27783281..27794194)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (27555871..27566851)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene BTB/POZ and MATH domain-containing protein 1 Neighboring gene rhomboid-like protein 19 Neighboring gene uncharacterized LOC136357216 Neighboring gene probable pectinesterase 66 Neighboring gene uncharacterized LOC4344143

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    protein HUA2-LIKE 2
    Names
    Os07g0655500
    P0018C07.118
    transcription factor (PWWP domain protein) -like protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      27783281..27794194
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015791409.3XP_015646895.1  protein HUA2-LIKE 2

      UniProtKB/TrEMBL
      A0A0P0X9K5, Q0D412, Q8H3E3
      Conserved Domains (2) summary
      cd05834
      Location:22108
      HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...
      cl02544
      Location:840970
      VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily