CWZF3 Cysteine-tryptophan domain-containing zinc finger protein 3 [Oryza sativa Japonica Group (Japanese rice)] - Gene

Summary

Gene symbol: CWZF3
Gene description: Cysteine-tryptophan domain-containing zinc finger protein 3
Locus tag: OSNPB_030347300
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Oryza sativa Japonica Group
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as: OsCW-ZF3
Expression: Ubiquitous expression in roots after flowering (RPKM 13.6), leaves before flowering (RPKM 11.4) and 6 other tissues See more
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Genomic context

Location:: chromosome: 3

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
RS_2024_06	current	ASM3414082v1 (GCF_034140825.1)	3	NC_089037.1 (13044506..13057868, complement)
102	previous assembly	IRGSP-1.0 (GCF_001433935.1)	3	NC_029258.1 (12988757..13002119, complement)

Chromosome 3 - NC_089037.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
BioProject: PRJNA243371
Publication: PMID 26387578
Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: cysteine-tryptophan domain-containing zinc finger protein 3

Names: LOC_Os03g22580; Os03g0347300

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001417737.1 → NP_001404666.1 cysteine-tryptophan domain-containing zinc finger protein 3

Status: VALIDATED

Source sequence(s)

AP014959, CI214663

UniProtKB/TrEMBL

B8APF4

RNA

NR_184573.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

AP014959, CI002352
NR_184574.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

AP014959, CI079663