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    LOC4325293 UDP-glycosyltransferase 88B1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325293, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4325293
    Gene description
    UDP-glycosyltransferase 88B1
    Locus tag
    OSNPB_010697100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1116_H09.18
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    Genomic context

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    See LOC4325293 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (29436173..29438205, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (28847890..28849833, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene ABC transporter B family member 4 Neighboring gene uncharacterized LOC107279517 Neighboring gene aspartic proteinase nepenthesin-1 Neighboring gene uncharacterized LOC4325295 Neighboring gene uncharacterized LOC4325296 Neighboring gene small nucleolar RNA snoR101

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UDP-glycosyltransferase 88B1
    Names
    Os01g0697100
    glucosyltransferase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      29436173..29438205 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015772131.3 → XP_015627617.1  UDP-glycosyltransferase 88B1

      UniProtKB/TrEMBL
      A0A8J8Y9G4, B8A820, B9EYZ7, Q0JK44, Q8LJ11
      Conserved Domains (1) summary
      cl10013
      Location:15 → 484
      Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
    Nucleotide Protein
    Heading Accession and Version

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