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    LOC4337946 glyoxylase I 4 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4337946, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4337946
    Gene description
    glyoxylase I 4
    Locus tag
    OSNPB_050171900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4337946 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (4320498..4324970)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (4301438..4306048)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136356531 Neighboring gene uncharacterized LOC107281047 Neighboring gene F-box protein At1g67130 Neighboring gene F-box protein At5g07610

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    glyoxylase I 4
    Names
    Os05g0171900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      4320498..4324970
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015783830.3 → XP_015639316.1  glyoxylase I 4

      UniProtKB/TrEMBL
      A0A9E8AB15, A2Y0V7, B9FHZ2, Q65XR4
      Conserved Domains (1) summary
      cd07245
      Location:23 → 141
      VOC_like; uncharacterized subfamily of vicinal oxygen chelate (VOC) family
    Nucleotide Protein
    Heading Accession and Version

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