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    LOC4345658 probable glucomannan 4-beta-mannosyltransferase 11 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4345658, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4345658
    Gene description
    probable glucomannan 4-beta-mannosyltransferase 11
    Locus tag
    OSNPB_080434500
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    CSLA11; OsCslA11
    Annotation information
    not in current annotation release
    Expression
    Broad expression in leaves before flowering (RPKM 15.7), flowers (RPKM 5.9) and 4 other tissues See more
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    Genomic context

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    See LOC4345658 in Genome Data Viewer
    Location:
    chromosome: 8
    Annotation release Status Assembly Chr Location
    102 latest, but not current IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (21077631..21086653)

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    probable glucomannan 4-beta-mannosyltransferase 11
    Names
    Cellulose synthase-like protein A11
    Glucomannan synthase
    LOC_Os08g33740
    Mannan synthase 11
    Os08g0434632
    P0413H11.13
    P0431A03.35
    probable mannan synthase 11
    putative glycosyltransferase
    NP_001409506.1
    NP_001409507.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001422577.1 → NP_001409506.1  probable glucomannan 4-beta-mannosyltransferase 11 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AP014964, CI738421

    2. NM_001422578.1 → NP_001409507.1  probable glucomannan 4-beta-mannosyltransferase 11 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AP014964
      UniProtKB/Swiss-Prot
      Q0J5H2, Q6YWK8
      UniProtKB/TrEMBL
      B8BB13
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6YWK8.1 GenPept UniProtKB/Swiss-Prot:Q6YWK8

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