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    LOC4338500 ERBB-3 BINDING PROTEIN 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4338500, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4338500
    Gene description
    ERBB-3 BINDING PROTEIN 1
    Locus tag
    OSNPB_050350500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    Rgbp16
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    Genomic context

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    See LOC4338500 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (16644493..16647936)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (16552208..16555856)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene embryonic abundant protein 1-like Neighboring gene small nucleolar RNA R71 Neighboring gene ran-binding protein 1 homolog c Neighboring gene uncharacterized LOC4338502

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ERBB-3 BINDING PROTEIN 1
    Names
    DNA-binding protein GBP16
    Os05g0350500

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      16644493..16647936
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785210.3 → XP_015640696.1  ERBB-3 BINDING PROTEIN 1

      UniProtKB/TrEMBL
      O22523, Q0DIY5, Q5W6H1
      Conserved Domains (1) summary
      cl00279
      Location:1 → 358
      APP_MetAP; A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity ...
    Nucleotide Protein
    Heading Accession and Version

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