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    LOC4346900 putative F-box protein At2g02030 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4346900, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4346900
    Gene description
    putative F-box protein At2g02030
    Locus tag
    OSNPB_090372900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4346900 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (16794529..16796559, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (12437064..12439230, complement)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene ASC1-like protein 1 Neighboring gene uncharacterized LOC4346899 Neighboring gene mitochondrial pyruvate carrier 1 Neighboring gene uncharacterized LOC136351933

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative F-box protein At2g02030
    Names
    F-box domain-containing protein
    Os09g0372900
    P0599F09.14-1
    P0599F09.14-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      16794529..16796559 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756388.3 → XP_015611874.1  putative F-box protein At2g02030

      UniProtKB/TrEMBL
      A0A0N7KQP4, A0A0P0XKW5, A0A8J8Y1E9, A2Z0L0, A3BY80, Q6H4I3, Q6H4I4
      Conserved Domains (2) summary
      cl23987
      Location:106 → 297
      FBA_1; F-box associated
      pfam00646
      Location:17 → 59
      F-box; F-box domain
    Nucleotide Protein
    Heading Accession and Version

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