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    LOC4329607 uncharacterized LOC4329607 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4329607, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4329607
    Gene description
    uncharacterized LOC4329607
    Locus tag
    OSNPB_020543900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4329607 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (20705358..20713555)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (20226894..20235123)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112937977 Neighboring gene uncharacterized LOC112937984 Neighboring gene uncharacterized LOC136355265 Neighboring gene myosin-8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4329607
    Names
    Os02g0543900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      20705358..20713555
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026022714.2 → XP_025878499.1  uncharacterized protein LOC4329607 isoform X1

      Conserved Domains (2) summary
      pfam13952
      Location:244 → 319
      DUF4216; Domain of unknown function (DUF4216)
      pfam13960
      Location:14 → 64
      DUF4218; Domain of unknown function (DUF4218)

    2. XM_026022718.2 → XP_025878503.1  uncharacterized protein LOC4329607 isoform X6

      UniProtKB/TrEMBL
      A0A0P0VKB6, B7EVA8, Q0E0J8
      Conserved Domains (2) summary
      pfam13952
      Location:212 → 287
      DUF4216; Domain of unknown function (DUF4216)
      pfam13960
      Location:1 → 32
      DUF4218; Domain of unknown function (DUF4218)

    3. XM_015769400.3 → XP_015624886.1  uncharacterized protein LOC4329607 isoform X5

      Conserved Domains (2) summary
      pfam13952
      Location:244 → 319
      DUF4216; Domain of unknown function (DUF4216)
      pfam13960
      Location:14 → 64
      DUF4218; Domain of unknown function (DUF4218)

    4. XM_015769399.3 → XP_015624885.1  uncharacterized protein LOC4329607 isoform X4

      Conserved Domains (2) summary
      pfam13952
      Location:244 → 319
      DUF4216; Domain of unknown function (DUF4216)
      pfam13960
      Location:14 → 64
      DUF4218; Domain of unknown function (DUF4218)

    5. XM_026022716.2 → XP_025878501.1  uncharacterized protein LOC4329607 isoform X2

      Conserved Domains (2) summary
      pfam13952
      Location:244 → 319
      DUF4216; Domain of unknown function (DUF4216)
      pfam13960
      Location:14 → 64
      DUF4218; Domain of unknown function (DUF4218)

    6. XM_066307092.1 → XP_066163189.1  uncharacterized protein LOC4329607 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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