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    LOC4325380 F-box/FBD/LRR-repeat protein At1g16930 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325380, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4325380
    Gene description
    F-box/FBD/LRR-repeat protein At1g16930
    Locus tag
    OSNPB_010653700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4325380 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (27031091..27034700)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (26449056..26452788)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4325379 Neighboring gene uncharacterized LOC107281468 Neighboring gene uncharacterized LOC4324171 Neighboring gene uncharacterized LOC4324172

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box/FBD/LRR-repeat protein At1g16930
    Names
    F-box domain-containing protein
    OSJNBb0006H05.17-1
    OSJNBb0032K15.36-1
    Os01g0653700
    plant disease resistance polyprotein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      27031091..27034700
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756352.3 → XP_015611838.1  F-box/FBD/LRR-repeat protein At1g16930

      UniProtKB/TrEMBL
      B8A6U2, B9EYD5, Q5VPA9, Q5VPC9
    Nucleotide Protein
    Heading Accession and Version

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