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    LOC4327131 uncharacterized LOC4327131 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327131, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4327131
    Gene description
    uncharacterized LOC4327131
    Locus tag
    OSNPB_010175000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4327131 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (3856041..3859971, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (3846248..3850266, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene protein kinase PINOID 2-like Neighboring gene monothiol glutaredoxin-S1, mitochondrial-like Neighboring gene protein THYLAKOID RHODANESE-LIKE, chloroplastic-like Neighboring gene uncharacterized LOC4326215 Neighboring gene uncharacterized LOC112937940

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4327131
    Names
    OSJNBa0089K24.29-1
    OSJNBa0089K24.29-2
    Os01g0175000
    acyl-protein thioesterase 1 homolog 1
    putative lysophospholipase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      3856041..3859971 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015775747.3 → XP_015631233.1  uncharacterized protein LOC4327131

      UniProtKB/TrEMBL
      A0A0P0UYP5, A0A0P0UYX4, A0A8J8XNC0, B9ETE4, Q94E46
      Conserved Domains (1) summary
      cl21494
      Location:25 → 249
      Abhydrolase; alpha/beta hydrolases

    2. XM_015775830.3 → XP_015631316.1  uncharacterized protein LOC4327131

      UniProtKB/TrEMBL
      A0A0P0UYP5, A0A0P0UYX4, A0A8J8XNC0, B9ETE4, Q94E46
      Conserved Domains (1) summary
      cl21494
      Location:25 → 249
      Abhydrolase; alpha/beta hydrolases

    3. XM_066303342.1 → XP_066159439.1  uncharacterized protein LOC4327131

      UniProtKB/TrEMBL
      A0A0P0UYP5, Q94E46
    Nucleotide Protein
    Heading Accession and Version

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