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    LOC4346503 thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP5 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4346503, updated on 12-Jul-2024

    Summary

    Gene symbol
    LOC4346503
    Gene description
    thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP5
    Locus tag
    OSNPB_090249000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    kr1; OJ1695_A02.17
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    Genomic context

    See LOC4346503 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (8078877..8081241, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (3732412..3734888, complement)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene protein ALP1-like Neighboring gene 2-oxoglutarate-dependent dioxygenase 33-like Neighboring gene CASP-like protein 5B3 Neighboring gene protein RDM16

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables enzyme regulator activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in nitrile biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP5
    Names
    Os09g0249000
    kelch repeat containing protein
    nitrile-specifier protein 5
    putative D-protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      8078877..8081241 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756729.3XP_015612215.1  thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP5

      UniProtKB/TrEMBL
      B8BD95, Q0J381, Q6ZXK6
      Conserved Domains (2) summary
      PLN02193
      Location:2327
      PLN02193; nitrile-specifier protein
      sd00038
      Location:73117
      Kelch; KELCH repeat [structural motif]