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    LOC107277164 uncharacterized LOC107277164 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 107277164, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC107277164
    Gene description
    uncharacterized LOC107277164
    Locus tag
    OSNPB_110427500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC107277164 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (15486368..15491469, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (13632330..13637436, complement)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136354171 Neighboring gene uncharacterized LOC136353885 Neighboring gene uncharacterized LOC136353948 Neighboring gene adenine/guanine permease AZG2 Neighboring gene non-specific lipid-transfer protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC107277164
    Names
    Os11g0427500

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      15486368..15491469 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015762165.3 → XP_015617651.1  uncharacterized protein LOC107277164

      UniProtKB/TrEMBL
      A0A0P0Y1J0
      Conserved Domains (1) summary
      cl23759
      Location:150 → 242
      GT1; myb-like, SANT family

    2. XM_015762164.3 → XP_015617650.1  uncharacterized protein LOC107277164

      UniProtKB/TrEMBL
      A0A0P0Y1J0
      Conserved Domains (1) summary
      cl23759
      Location:150 → 242
      GT1; myb-like, SANT family
    Nucleotide Protein
    Heading Accession and Version

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