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    LOC4344500 probable methyltransferase At1g29790 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344500, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4344500
    Gene description
    probable methyltransferase At1g29790
    Locus tag
    OSNPB_080113400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0427G12.2
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    Genomic context

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    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (725949..727471, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (720425..723732, complement)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4344498 Neighboring gene E3 ubiquitin-protein ligase CHIP Neighboring gene NAC domain-containing protein 35-like Neighboring gene uncharacterized LOC4344504

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable methyltransferase At1g29790
    Names
    Os08g0113400
    P0498H04.32

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      725949..727471 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015793976.3 → XP_015649462.1  probable methyltransferase At1g29790

      UniProtKB/TrEMBL
      B8BA62, Q6YXU4, Q6ZCB8
      Conserved Domains (1) summary
      pfam13649
      Location:282 → 371
      Methyltransf_25; Methyltransferase domain
    Nucleotide Protein
    Heading Accession and Version

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