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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_011468.1 RefSeqGene
- Range
-
5001..12654
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_004994.3 → NP_004985.2 matrix metalloproteinase-9 preproprotein
Status: REVIEWED
- Source sequence(s)
-
AW468235, BC006093, CN288579, J05070
- Consensus CDS
-
CCDS13390.1
- UniProtKB/Swiss-Prot
- B2R7V9, P14780, Q3LR70, Q8N725, Q9H4Z1, Q9UCJ9, Q9UCL1, Q9UDK2
- UniProtKB/TrEMBL
-
B7Z507
- Related
- ENSP00000361405.3, ENST00000372330.3
- Conserved Domains (6) summary
-
- smart00059
Location:281 → 329
- FN2; Fibronectin type 2 domain
- cd00094
Location:514 → 704
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- cd04278
Location:115 → 444
- ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...
- pfam00040
Location:347 → 388
- fn2; Fibronectin type II domain
- pfam00413
Location:115 → 444
- Peptidase_M10; Matrixin
- pfam04886
Location:472 → 506
- PT; PT repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000020.11 Reference GRCh38.p14 Primary Assembly
- Range
-
46008908..46016561
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060944.1 Alternate T2T-CHM13v2.0
- Range
-
47744921..47752589
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)