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    LOC4349165 cytochrome P450 704C1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349165, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4349165
    Gene description
    cytochrome P450 704C1
    Locus tag
    OSNPB_100525000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4349165 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (21103483..21107458, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (20412039..20416485, complement)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene subtilisin-like protease Neighboring gene cytochrome P450 704C1 Neighboring gene cytochrome P450 704C1 Neighboring gene glutathione S-transferase U17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome P450 704C1
    Names
    Os10g0525000

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      21103483..21107458 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015759368.3 → XP_015614854.1  cytochrome P450 704C1 isoform X1

      UniProtKB/TrEMBL
      A0A0P0XWW2, A3C6M9, Q8S7S6
      Conserved Domains (1) summary
      cd11064
      Location:74 → 508
      CYP86A; cytochrome P450 family 86, subfamily A

    2. XM_015759369.3 → XP_015614855.1  cytochrome P450 704C1 isoform X2

      UniProtKB/TrEMBL
      A0A0P0XWG8, A2XV93
      Conserved Domains (1) summary
      PLN03195
      Location:1 → 400
      PLN03195; fatty acid omega-hydroxylase; Provisional

    3. XM_066304751.1 → XP_066160848.1  cytochrome P450 704C1 isoform X3

      UniProtKB/TrEMBL
      Q109D2
    Nucleotide Protein
    Heading Accession and Version

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