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    LOC4323945 phenylacetaldehyde reductase [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4323945, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4323945
    Gene description
    phenylacetaldehyde reductase
    Locus tag
    OSNPB_010528800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4323945 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (19577426..19581845)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (19009712..19014145)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene uncharacterized LOC107276739 Neighboring gene uncharacterized LOC136354952 Neighboring gene uncharacterized LOC136355350

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phenylacetaldehyde reductase
    Names
    B1129H01.17
    Os01g0528800
    putative cinnamyl alcohol dehydrogenase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      19577426..19581845
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015766132.3 → XP_015621618.1  phenylacetaldehyde reductase

      UniProtKB/TrEMBL
      A0A0P0V3L3, A2WQX7, A2ZTY4, Q5QM39
      Conserved Domains (1) summary
      PLN02662
      Location:9 → 330
      PLN02662; cinnamyl-alcohol dehydrogenase family protein
    Nucleotide Protein
    Heading Accession and Version

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