KIN4A kinesin-like protein KIN-4A [Oryza sativa Japonica Group (Japanese rice)] - Gene

Summary

Gene symbol: KIN4A
Gene description: kinesin-like protein KIN-4A
Locus tag: OSNPB_090114500
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Oryza sativa Japonica Group
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as: BC2; GDD1; KIF4-like; OsJ_28385; OJ1134_E08.39-1; OJ1134_E08.39-2; OJ1134_E08.39-3
Expression: Broad expression in flowers (RPKM 18.4), flower buds (RPKM 13.2) and 6 other tissues See more
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Genomic context

Location:: chromosome: 9

Exon count:: 25

Annotation release	Status	Assembly	Chr	Location
RS_2024_06	current	ASM3414082v1 (GCF_034140825.1)	9	NC_089043.1 (5178040..5187830)
102	previous assembly	IRGSP-1.0 (GCF_001433935.1)	9	NC_029264.1 (1158010..1167872)

Chromosome 9 - NC_089043.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
BioProject: PRJNA243371
Publication: PMID 26387578
Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Characterization of a novel allele of bc12/gdd1 indicates a differential leaf color function for BC12/GDD1 in Indica and Japonica backgrounds.
Title: Characterization of a novel allele of bc12/gdd1 indicates a differential leaf color function for BC12/GDD1 in Indica and Japonica backgrounds.

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables microtubule binding	IEA Inferred from Electronic Annotation more info	PubMed
enables microtubule motor activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in microtubule-based movement	IEA Inferred from Electronic Annotation more info	PubMed
involved_in mitotic spindle organization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in spindle elongation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of microtubule associated complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: kinesin-like protein KIN-4A

Names: LOC_Os09g02650; Protein BRITTLE CULM 2; Protein GIBBERELLIN-DEFICIENT DWARF 1; kinesin-like protein BC2; putative KIF4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.