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    LOC4344902 NAC domain-containing protein 21/22 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344902, updated on 16-Jul-2024

    Summary

    Gene symbol
    LOC4344902
    Gene description
    NAC domain-containing protein 21/22
    Locus tag
    OSNPB_080200600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Broad expression in leaves after flowering (RPKM 3.4), flowers (RPKM 3.3) and 6 other tissues See more
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    Genomic context

    See LOC4344902 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (5897690..5901409, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (5846860..5850839, complement)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene KH domain-containing protein At4g18375 Neighboring gene cold-responsive protein kinase 1 Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene uncharacterized LOC9268134 Neighboring gene transfer RNA arginine (anticodon CCG)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    General protein information

    Preferred Names
    NAC domain-containing protein 21/22
    Names
    OSJNBa0073I05.109-1
    Os08g0200600
    P0556A11.29-1
    putative NAC domain protein NAC1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      5897690..5901409 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015792832.3XP_015648318.1  NAC domain-containing protein 21/22

      UniProtKB/TrEMBL
      A2YS82, A3BQJ7, Q6Z1A3, Q6ZBU8
      Conserved Domains (1) summary
      pfam02365
      Location:12157
      NAM; No apical meristem (NAM) protein