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    LOC4349406 RNA-binding KH domain-containing protein PEPPER [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349406, updated on 17-Jul-2024

    Summary

    Gene symbol
    LOC4349406
    Gene description
    RNA-binding KH domain-containing protein PEPPER
    Locus tag
    OSNPB_100564000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

    See LOC4349406 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (22966609..22970145)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (22274494..22278014)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136353783 Neighboring gene cyclin-P4-1-like Neighboring gene mediator of RNA polymerase II transcription subunit 31 Neighboring gene trihelix transcription factor ENAP1

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    RNA-binding KH domain-containing protein PEPPER
    Names
    Os10g0564000

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      22966609..22970145
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015757256.3XP_015612742.1  RNA-binding KH domain-containing protein PEPPER

      UniProtKB/TrEMBL
      A0A5S6R9Z5, A0A8J8YKK3, A2ZAB0, A3C7D5, Q7XC34, Q9AY47
      Conserved Domains (1) summary
      cl00098
      Location:330396
      KH-I; K homology (KH) RNA-binding domain, type I