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    LOC4333470 uncharacterized LOC4333470 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4333470, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4333470
    Gene description
    uncharacterized LOC4333470
    Locus tag
    OSNPB_030621400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4333470 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (24417018..24424153)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (23556125..23562968)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene cytochrome P450 89A2-like Neighboring gene putative B3 domain-containing protein Os03g0621600 Neighboring gene putative B3 domain-containing protein Os03g0621600

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4333470
    Names
    Os03g0621400
    hsp70-Hsp90 organizing protein 2
    protein fem-1 homolog A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      24417018..24424153
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015773648.3 → XP_015629134.1  uncharacterized protein LOC4333470 isoform X2

      UniProtKB/TrEMBL
      A0A8J8XY05, B8AML0, B9F9R2, Q10GN0
      Conserved Domains (4) summary
      PLN03088
      Location:274 → 383
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:276 → 301
      TPR; TPR repeat [structural motif]
      sd00045
      Location:69 → 96
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:103 → 191
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_015773647.3 → XP_015629133.1  uncharacterized protein LOC4333470 isoform X1

      UniProtKB/TrEMBL
      B8AML0
      Conserved Domains (5) summary
      PLN03088
      Location:274 → 384
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:276 → 301
      TPR; TPR repeat [structural motif]
      sd00045
      Location:69 → 96
      ANK; ANK repeat [structural motif]
      pfam00023
      Location:195 → 226
      Ank; Ankyrin repeat
      pfam12796
      Location:103 → 191
      Ank_2; Ankyrin repeats (3 copies)

    RNA

    1. XR_010740469.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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