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    LOC9267237 uncharacterized LOC9267237 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9267237, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9267237
    Gene description
    uncharacterized LOC9267237
    Locus tag
    OSNPB_030205150
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Ubiquitous expression in leaves after flowering (RPKM 17.1), roots after flowering (RPKM 13.6) and 6 other tissues See more
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    Genomic context

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    See LOC9267237 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (5538612..5541725, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (5491324..5494485, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4331989 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene transcription factor RSL2 Neighboring gene DNA repair protein UVH3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC9267237
    Names
    Os03g0205150

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      5538612..5541725 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015773352.3 → XP_015628838.1  uncharacterized protein LOC9267237

      UniProtKB/TrEMBL
      A0A0P0VUH5, B8AQF5

    2. XM_015773354.3 → XP_015628840.1  uncharacterized protein LOC9267237

      UniProtKB/TrEMBL
      A0A0P0VUH5, B8AQF5
    Nucleotide Protein
    Heading Accession and Version

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