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    LOC4341917 probable receptor-like serine/threonine-protein kinase At5g57670 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4341917, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4341917
    Gene description
    probable receptor-like serine/threonine-protein kinase At5g57670
    Locus tag
    OSNPB_060693200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4341917 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (29807918..29810398)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (28941122..28943774)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene cysteine-rich receptor-like protein kinase 44 Neighboring gene putative disease resistance protein RGA3 Neighboring gene U6 spliceosomal RNA Neighboring gene replication protein A 32 kDa subunit C-like Neighboring gene uncharacterized LOC112939446

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable receptor-like serine/threonine-protein kinase At5g57670
    Names
    Os06g0693200
    P0532H03.44-2
    P0550B04.14-1
    P0550B04.14-2
    SERK1 protein-like
    putative benzothiadiazole-induced somatic embryogenesis receptor kinase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      29807918..29810398
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015786691.3 → XP_015642177.1  probable receptor-like serine/threonine-protein kinase At5g57670

      UniProtKB/TrEMBL
      A0A0P0X0G7, A3BEX8, Q5Z8L3
      Conserved Domains (1) summary
      cl21453
      Location:75 → 339
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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