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    LOC4341451 uncharacterized LOC4341451 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4341451, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4341451
    Gene description
    uncharacterized LOC4341451
    Locus tag
    OSNPB_060600700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4341451 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (24573570..24578643, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (23721772..23726858, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene GTP-binding nuclear protein Ran-3 Neighboring gene cytochrome P450 734A4-like Neighboring gene uncharacterized LOC9267613 Neighboring gene protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4341451
    Names
    Os06g0600700
    P0457B11.13-1
    P0486H12.1-1
    agenet domain-containing protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      24573570..24578643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785475.3 → XP_015640961.1  uncharacterized protein LOC4341451 isoform X2

      UniProtKB/TrEMBL
      A0A0P0WYH8, Q0DB58
      Conserved Domains (2) summary
      smart00743
      Location:69 → 124
      Agenet; Tudor-like domain present in plant sequences
      pfam05641
      Location:6 → 63
      Agenet; Agenet domain

    2. XM_015785474.3 → XP_015640960.1  uncharacterized protein LOC4341451 isoform X1

      UniProtKB/TrEMBL
      A0A0P0WYD2, Q69XL1
      Conserved Domains (2) summary
      smart00743
      Location:69 → 124
      Agenet; Tudor-like domain present in plant sequences
      pfam05641
      Location:6 → 63
      Agenet; Agenet domain

    RNA

    1. XR_010742018.1 RNA Sequence

    2. XR_001546347.3 RNA Sequence

    3. XR_001546346.3 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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