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    LOC4336063 non-specific lipid transfer protein GPI-anchored 5 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336063, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4336063
    Gene description
    non-specific lipid transfer protein GPI-anchored 5
    Locus tag
    OSNPB_040462200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4336063 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (23587519..23588443)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (23093058..23094076)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136356286 Neighboring gene formin-like protein 2 Neighboring gene uncharacterized LOC136356264 Neighboring gene uncharacterized LOC4336064 Neighboring gene lysine histidine transporter-like 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    non-specific lipid transfer protein GPI-anchored 5
    Names
    Os04g0462200

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      23587519..23588443
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015778819.3 → XP_015634305.1  non-specific lipid transfer protein GPI-anchored 5

      UniProtKB/TrEMBL
      A2XUA2, A3AUK0, Q6MWD3, Q7XTF1
      Conserved Domains (1) summary
      cd00010
      Location:46 → 110
      AAI_LTSS; Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. ...
    Nucleotide Protein
    Heading Accession and Version

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