ndufb5 NADH:ubiquinone oxidoreductase subunit B5 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ndufb5provided by ZNC
Official Full Name: NADH:ubiquinone oxidoreductase subunit B5provided by ZNC
Primary source: ZFIN:ZDB-GENE-011010-1
See related: Ensembl:ENSDARG00000070824 AllianceGenome:ZFIN:ZDB-GENE-011010-1
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: hm:zeh0024; zgc:123331
Summary: Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex I. Orthologous to human NDUFB5 (NADH:ubiquinone oxidoreductase subunit B5). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (29403020..29409941)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (29412459..29419380)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fd04e05.y1 (e-PCR)
- UniSTS:194919

AI353094 (e-PCR)
- UniSTS:206773

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
part_of respiratory chain complex I	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial

Names: NADH dehydrogenase (ubiquinone) 1 beta subcomplex 5

NP_001099066.1

EC 1.6.99.3

EC 7.1.1.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001105596.1 → NP_001099066.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial

See identical proteins and their annotated locations for NP_001099066.1

Status: PROVISIONAL

Source sequence(s)

BC153535

UniProtKB/TrEMBL

A8E5B7, A8WGK0

Related

ENSDARP00000095073.4, ENSDART00000104298.5

Conserved Domains (1) summary

pfam09781
Location:1 → 185

NDUF_B5; NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit