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    ogal O-GlcNAcase like [ Danio rerio (zebrafish) ]

    Gene ID: 571547, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ogalprovided by ZNC
    Official Full Name
    O-GlcNAcase likeprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-110914-153
    See related
    Ensembl:ENSDARG00000103266 AllianceGenome:ZFIN:ZDB-GENE-110914-153
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    mgea5l; si:dkey-93h22.6
    Summary
    Predicted to enable beta-N-acetylglucosaminidase activity. Predicted to be involved in glycoprotein metabolic process. Orthologous to human OGA (O-GlcNAcase). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    Location:
    chromosome: 11
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (45110831..45125944)
    105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (44696428..44711586)

    Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like Neighboring gene si:dkey-93h22.8 Neighboring gene si:dkey-93h22.4 Neighboring gene calcium activated nucleotidase 1b Neighboring gene arylformamidase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. A network of epigenetic regulators guides developmental haematopoiesis in vivo. Huang HT, et al. Nat Cell Biol, 2013 Dec. PMID 24240475, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables beta-N-acetylglucosaminidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in glycoprotein metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    protein O-GlcNAcase-like; si:dkey-93h22.6
    Names
    meningioma expressed antigen 5 (hyaluronidase) like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007122.7 Reference GRCz11 Primary Assembly

      Range
      45110831..45125944
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009306329.3 → XP_009304604.1  protein O-GlcNAcase-like

      UniProtKB/TrEMBL
      A0A0R4IC35, A0A8M3B747
      Related
      ENSDARP00000132557.1, ENSDART00000158188.3
      Conserved Domains (1) summary
      pfam07555
      Location:11 → 312
      NAGidase; beta-N-acetylglucosaminidase
    Nucleotide Protein
    Heading Accession and Version

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