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    fam43b family with sequence similarity 43 member B [ Danio rerio (zebrafish) ]

    Gene ID: 447808, updated on 2-Nov-2024

    Summary

    Official Symbol
    fam43bprovided by ZNC
    Official Full Name
    family with sequence similarity 43 member Bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040912-11
    See related
    Ensembl:ENSDARG00000070222 AllianceGenome:ZFIN:ZDB-GENE-040912-11
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:92105
    Summary
    Acts upstream of or within vasculature development. Is expressed in forebrain; somite border; and vasculature. Orthologous to human FAM43B (family with sequence similarity 43 member B). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See fam43b in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (37323962..37325961)
    105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (37221300..37223299)

    Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene calcium/calmodulin-dependent protein kinase II inhibitor 1b Neighboring gene mitochondrial E3 ubiquitin protein ligase 1 Neighboring gene uncharacterized LOC108181458 Neighboring gene uncharacterized LOC101884801 Neighboring gene zmp:0000001088

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within vasculature development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    protein FAM43B
    Names
    TUF1
    somitovasculin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001004547.1NP_001004547.1  protein FAM43B

      See identical proteins and their annotated locations for NP_001004547.1

      Status: PROVISIONAL

      Source sequence(s)
      BC081596
      UniProtKB/TrEMBL
      Q66I09
      Related
      ENSDARP00000093655.1, ENSDART00000102881.2
      Conserved Domains (1) summary
      cl17171
      Location:71254
      PH-like; Pleckstrin homology-like domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007134.7 Reference GRCz11 Primary Assembly

      Range
      37323962..37325961
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)