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    znf185 zinc finger protein 185 with LIM domain [ Danio rerio (zebrafish) ]

    Gene ID: 553349, updated on 2-Nov-2024

    Summary

    Official Symbol
    znf185provided by ZNC
    Official Full Name
    zinc finger protein 185 with LIM domainprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-061103-355
    See related
    Ensembl:ENSDARG00000103917 AllianceGenome:ZFIN:ZDB-GENE-061103-355
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fd02a11; zgc:152778
    Summary
    Predicted to enable metal ion binding activity. Is expressed in EVL. Orthologous to human ZNF185 (zinc finger protein 185 with LIM domain). [provided by Alliance of Genome Resources, Nov 2024]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
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    Genomic context

    See znf185 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (14622944..14643176, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (14317381..14337613, complement)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene proteolipid protein 1a Neighboring gene RAB9B, member RAS oncogene family Neighboring gene fucosyltransferase 11 (alpha (1,3) fucosyltransferase) Neighboring gene NAD(P) dependent steroid dehydrogenase-like Neighboring gene centrin, EF-hand protein, 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    zinc finger protein 185
    Names
    zinc finger protein 185 (LIM domain)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077536.1NP_001071004.1  zinc finger protein 185

      See identical proteins and their annotated locations for NP_001071004.1

      Status: PROVISIONAL

      Source sequence(s)
      BC125817
      UniProtKB/TrEMBL
      A0JMB8
      Related
      ENSDARP00000135416.1, ENSDART00000167119.2
      Conserved Domains (1) summary
      smart00132
      Location:10321087
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      14622944..14643176 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)