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    TCP10L3 t-complex 10 like 3 (pseudogene) [ Homo sapiens (human) ]

    Gene ID: 6953, updated on 17-Sep-2024

    Summary

    Official Symbol
    TCP10L3provided by HGNC
    Official Full Name
    t-complex 10 like 3 (pseudogene)provided by HGNC
    Primary source
    HGNC:HGNC:11656
    See related
    Ensembl:ENSG00000290751 MIM:187020; AllianceGenome:HGNC:11656
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TCP10; TCP10A
    Annotation information
    Annotation category: suggests misassembly
    Expression
    Restricted expression toward testis (RPKM 4.5) See more
    Orthologs
    NEW
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    Genomic context

    See TCP10L3 in Genome Data Viewer
    Location:
    6q27
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (167373090..167384510, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (168755727..168767109, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (167786578..167797998, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:167738113-167738614 Neighboring gene tubulin tyrosine ligase like 2 Neighboring gene mitotic arrest deficient 2 like 1 pseudogene Neighboring gene Sharpr-MPRA regulatory region 6086 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:167769573-167770114 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:167813964-167814643 Neighboring gene Sharpr-MPRA regulatory region 8873 Neighboring gene Sharpr-MPRA regulatory region 3778 Neighboring gene uncharacterized LOC105378126 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:167854012-167854880 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:167854881-167855750 Neighboring gene uncharacterized LOC105378127

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • T-complex protein 10A homolog
    • t-complex 10 (a murine tcp homolog)
    • t-complex 10 homolog

    Clone Names

    • MGC34049

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_163193.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL592444
      Related
      ENST00000674952.1
    2. NR_163194.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL592444
    3. NR_163195.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL592444
    4. NR_163196.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL592444
      Related
      ENST00000617120.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      167373090..167384510 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      168755727..168767109 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001366311.1: Suppressed sequence

      Description
      NM_001366311.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    2. NM_001366312.1: Suppressed sequence

      Description
      NM_001366312.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    3. NM_001366313.1: Suppressed sequence

      Description
      NM_001366313.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    4. NM_001366317.1: Suppressed sequence

      Description
      NM_001366317.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    5. NM_004610.3: Suppressed sequence

      Description
      NM_004610.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.