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    LOC105370475 uncharacterized LOC105370475 [ Homo sapiens (human) ]

    Gene ID: 105370475, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105370475
    Gene description
    uncharacterized LOC105370475
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105370475 in Genome Data Viewer
    Location:
    14q21.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (45366149..45389286)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (39558172..39581309)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene MPRA-validated peak2147 silencer Neighboring gene RNA, U6 small nuclear 552, pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:45763672-45764262 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:45764263-45764851 Neighboring gene DnaJ heat shock protein family (Hsp40) member C19 pseudogene 9 Neighboring gene uncharacterized LOC105370476 Neighboring gene NANOG hESC enhancer GRCh37_chr14:45964153-45964656 Neighboring gene uncharacterized LOC124903308 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr14:46021039-46021821 Neighboring gene uncharacterized LOC107984644

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      45366149..45389286
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_943817.4 RNA Sequence

    2. XR_943818.4 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      39558172..39581309
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007084663.1 RNA Sequence

    2. XR_007084664.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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