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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856578, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000001216
    Locus tag
    YHR173C
    See related
    AllianceGenome:SGD:S000001216; FungiDB:YHR173C; VEuPathDB:YHR173C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in fungal-type vacuole. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (450815..451153, complement)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Atg7p Neighboring gene Spc97p Neighboring gene phosphopyruvate hydratase ENO2 Neighboring gene low-affinity Cu transporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Factors affecting splicing strength of yeast genes. Ma P, et al. Comp Funct Genomics, 2011. PMID 22162666, Free PMC Article
    2. Dissecting the regulatory circuitry of a eukaryotic genome. Holstege FC, et al. Cell, 1998 Nov 25. PMID 9845373
    3. Global analysis of protein expression in yeast. Ghaemmaghami S, et al. Nature, 2003 Oct 16. PMID 14562106
    4. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Johnston M, et al. Science, 1994 Sep 30. PMID 8091229
    5. One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Yofe I, et al. Nat Methods, 2016 Apr. PMID 26928762, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in fungal-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001257667.1
    • hypothetical protein; expressed at both mRNA and protein levels; SWAT-GFP and mCherry fusion proteins localize to the vacuole

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      450815..451153 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001270738.1 → NP_001257667.1  TPA: uncharacterized protein YHR173C [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_001257667.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      I2HB51, P38864
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38864.1

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