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    ILM1 Ilm1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853582, updated on 1-Aug-2024

    Summary

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    Gene symbol
    ILM1
    Gene description
    Ilm1p
    Primary source
    FungiDB:YJR118C
    Locus tag
    YJR118C
    See related
    SGD:S000003879; AllianceGenome:SGD:S000003879; VEuPathDB:YJR118C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in mitochondrial genome maintenance. Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See ILM1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    1
    Sequence:
    Chromosome: X; NC_001142.9 (643490..644101, complement)

    Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene Tda4p Neighboring gene zinc metalloprotease Neighboring gene histone demethylase Neighboring gene Dmo1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001142.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The sensitivity of yeast mutants to oleic acid implicates the peroxisome and other processes in membrane function. Lockshon D, et al. Genetics, 2007 Jan. PMID 17151231, Free PMC Article
    2. The ER membrane protein complex interacts cotranslationally to enable biogenesis of multipass membrane proteins. Shurtleff MJ, et al. Elife, 2018 May 29. PMID 29809151, Free PMC Article
    3. Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach. Entian KD, et al. Mol Gen Genet, 1999 Dec. PMID 10628851
    4. Amino acid deprivation inhibits TORC1 through a GTPase-activating protein complex for the Rag family GTPase Gtr1. Panchaud N, et al. Sci Signal, 2013 May 28. PMID 23716719
    5. Genome-wide survey of non-essential genes required for slowed DNA synthesis-induced filamentous growth in yeast. Kang CM, et al. Yeast, 2005 Jan 30. PMID 15645503

    See all (64) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial genome maintenance IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Ilm1p
    NP_012652.3
    • hypothetical protein; may be involved in mitochondrial DNA maintenance; required for slowed DNA synthesis-induced filamentous growth

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001142.9 Reference assembly

      Range
      643490..644101 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181776.3 → NP_012652.3  TPA: Ilm1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012652.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VWT7, P47155
      UniProtKB/TrEMBL
      A6ZQ74, B3LQK2, B5VLR0, C7GM93, C8ZBR6, N1P194
      Conserved Domains (1) summary
      pfam10311
      Location:17 → 141
      Ilm1; Increased loss of mitochondrial DNA protein 1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P47155.1

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