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    CSI2 Csi2p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854155, updated on 17-May-2024

    Summary

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    Gene symbol
    CSI2
    Gene description
    Csi2p
    Primary source
    FungiDB:YOL007C
    Locus tag
    YOL007C
    See related
    SGD:S000005367; AllianceGenome:SGD:S000005367; VEuPathDB:YOL007C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cellular bud neck and fungal-type vacuole. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See CSI2 in Genome Data Viewer
    Location:
    chromosome: XV
    Exon count:
    1
    Sequence:
    Chromosome: XV; NC_001147.6 (311342..312367, complement)

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene ERMES complex subunit MDM12 Neighboring gene ubiquinone-binding protein COQ10 Neighboring gene DNA topoisomerase 1 Neighboring gene DNA-directed RNA polymerase II core subunit RPB11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001147.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Localization of proteins that are coordinately expressed with Cln2 during the cell cycle. Sundin BA, et al. Yeast, 2004 Jul 15. PMID 15282802
    2. Cdc37 engages in stable, S14A mutation-reinforced association with the most atypical member of the yeast kinome, Cdk-activating kinase (Cak1). Millson S, et al. Cell Stress Chaperones, 2014 Sep. PMID 24452458, Free PMC Article
    3. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549
    4. Whi3, a developmental regulator of budding yeast, binds a large set of mRNAs functionally related to the endoplasmic reticulum. Colomina N, et al. J Biol Chem, 2008 Oct 17. PMID 18667435, Free PMC Article
    5. Tubulin isotypes optimize distinct spindle positioning mechanisms during yeast mitosis. Nsamba ET, et al. J Cell Biol, 2021 Dec 6. PMID 34739032, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular bud neck IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cellular bud neck IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in fungal-type vacuole HDA PubMed 
    is_active_in fungal-type vacuole IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in fungal-type vacuole IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Csi2p
    NP_014636.1
    • hypothetical protein; green fluorescent protein (GFP)- fusion protein localizes to the mother side of the bud neck and the vacuole; YOL007C is not an essential gene

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6 Reference assembly

      Range
      311342..312367 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183261.1 → NP_014636.1  TPA: Csi2p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014636.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W260, Q08054
      UniProtKB/TrEMBL
      A6ZNJ9, B3LJ49, C7GJV9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q08054.1

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