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    GDS1 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854537, updated on 11-Sep-2024

    Summary

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    Official Symbol
    GDS1
    Primary source
    SGD:S000005882
    Locus tag
    YOR355W
    See related
    AllianceGenome:SGD:S000005882; FungiDB:YOR355W; VEuPathDB:YOR355W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in aerobic respiration. Located in mitochondrion and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: XV
    Exon count:
    1
    Sequence:
    Chromosome: XV; NC_001147.6 (1005137..1006705)

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene Sog2p Neighboring gene Msc6p Neighboring gene putative electron-transferring-flavoprotein dehydrogenase Neighboring gene Snx3p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001147.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gds1 Interacts with NuA4 To Promote H4 Acetylation at Ribosomal Protein Genes. Joo YJ, et al. Mol Cell Biol, 2022 Jan 20. PMID 34694912, Free PMC Article
    2. Global protein function prediction from protein-protein interaction networks. Vazquez A, et al. Nat Biotechnol, 2003 Jun. PMID 12740586
    3. Nucleotide sequence of the GDS1 gene of Saccharomyces cerevisiae. Konopinska A, et al. Yeast, 1995 Dec. PMID 8750239
    4. Sequestration of mRNAs Modulates the Timing of Translation during Meiosis in Budding Yeast. Jin L, et al. Mol Cell Biol, 2015 Oct. PMID 26217015, Free PMC Article
    5. The jmjN and jmjC domains of the yeast zinc finger protein Gis1 interact with 19 proteins involved in transcription, sumoylation and DNA repair. Tronnersjö S, et al. Mol Genet Genomics, 2007 Jan. PMID 17043893

    See all (45) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Nuclear organization (Predicted) Transcriptional control (Predicted)
      Title: Global protein function prediction from protein-protein interaction networks.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables NuA4 histone acetyltransferase complex binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in aerobic respiration IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in mitochondrion HDA PubMed 
    located_in nucleus HDA PubMed 
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Gds1p
    NP_015000.3
    • Protein involved in histone H4 acetylation at ribosomal protein genes; interacts with and modulates NuA4 histone acetyltransferase complex; required for growth on glycerol as a carbon source; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; contains a segment predicted to resemble the winged-helix/forkhead domain located in DNA-binding proteins

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6 Reference assembly

      Range
      1005137..1006705
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183775.3 → NP_015000.3  TPA: Gds1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_015000.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W350, P41913
      UniProtKB/TrEMBL
      A6ZPI5, B3LK12, B5VSN2, C7GNR3, C8ZHA5, G2WNL6, N1NW94
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P41913.1

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