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    Sertm2 serine rich and transmembrane domain containing 2 [ Mus musculus (house mouse) ]

    Gene ID: 319764, updated on 17-Aug-2024

    Summary

    Official Symbol
    Sertm2provided by MGI
    Official Full Name
    serine rich and transmembrane domain containing 2provided by MGI
    Primary source
    MGI:MGI:2442684
    See related
    Ensembl:ENSMUSG00000085139 AllianceGenome:MGI:2442684
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    A730046J19Rik
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human SERTM2 (serine rich and transmembrane domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    Location:
    X F2; X 65.23 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (142936691..142949270)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (144153695..144166274)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 33039 Neighboring gene STARR-seq mESC enhancer starr_48032 Neighboring gene predicted gene 15048 Neighboring gene ribosomal protein, large, P0 pseudogene Neighboring gene predicted gene 8202

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General protein information

    Preferred Names
    serine-rich and transmembrane domain-containing 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001354493.1NP_001341422.1  serine-rich and transmembrane domain-containing 2

      Status: VALIDATED

      Source sequence(s)
      AK039668, AK044075, CO044022
      Consensus CDS
      CCDS90758.1
      UniProtKB/Swiss-Prot
      A0A1B0GSN8
      Related
      ENSMUSP00000148011.2, ENSMUST00000135687.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      142936691..142949270
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)