arl4ab ADP-ribosylation factor-like 4ab [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: arl4abprovided by ZNC
Official Full Name: ADP-ribosylation factor-like 4abprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030219-167
See related: Ensembl:ENSDARG00000033182 AllianceGenome:ZFIN:ZDB-GENE-030219-167
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: arl4; arl4l; zgc:56555; zgc:77711; id:ibd5140
Summary: Predicted to enable GTP binding activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be active in cytoplasm and plasma membrane. Is expressed in several structures, including adaxial cell; axis; cardiovascular system; digestive system; and presumptive telencephalon. Orthologous to human ARL4A (ARF like GTPase 4A). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 19

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (31339305..31341850, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (31751992..31754537, complement)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables GTP binding	IBA Inferred from Biological aspect of Ancestor more info
enables GTP binding	IEA Inferred from Electronic Annotation more info
enables GTPase activity	IEA Inferred from Electronic Annotation more info
enables nucleotide binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in intracellular protein transport	IBA Inferred from Biological aspect of Ancestor more info
involved_in vesicle-mediated transport	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: ADP-ribosylation factor-like 4ab

Names: ADP-ribosylation factor-like 4, like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200318.2 → NP_956612.1 ADP-ribosylation factor-like 4ab

See identical proteins and their annotated locations for NP_956612.1

Status: PROVISIONAL

Source sequence(s)

BC051616

UniProtKB/TrEMBL

Q7ZTT9

Related

ENSDARP00000040809.3, ENSDART00000040810.4

Conserved Domains (2) summary

cd04152
Location:18 → 201

Arl4_Arl7; Arf-like 4 (Arl4) and 7 (Arl7) GTPases

COG1100
Location:23 → 148

Gem1; GTPase SAR1 family domain [General function prediction only]