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    cfap299 cilia and flagella associated protein 299 [ Danio rerio (zebrafish) ]

    Gene ID: 558475, updated on 9-Dec-2024

    Summary

    Official Symbol
    cfap299provided by ZNC
    Official Full Name
    cilia and flagella associated protein 299provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060526-173
    See related
    Ensembl:ENSDARG00000088753 AllianceGenome:ZFIN:ZDB-GENE-060526-173
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:ch211-57h10.1
    Summary
    Predicted to be located in cytoplasm. Orthologous to human CFAP299 (cilia and flagella associated protein 299). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See cfap299 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (39563300..39663735)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (38963147..39063582)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene PR domain containing 8b Neighboring gene fibroblast growth factor 5 Neighboring gene bone morphogenetic protein 3 Neighboring gene protein kinase cGMP-dependent 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cilia- and flagella-associated protein 299
    Names
    uncharacterized protein C4orf22 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001115124.1NP_001108596.1  cilia- and flagella-associated protein 299

      See identical proteins and their annotated locations for NP_001108596.1

      Status: PROVISIONAL

      Source sequence(s)
      AL929533, BX323826
      UniProtKB/Swiss-Prot
      A2AVJ0
      UniProtKB/TrEMBL
      A0A8M9Q3E8
      Related
      ENSDARP00000088644.4, ENSDART00000097872.5
      Conserved Domains (1) summary
      pfam14713
      Location:14228
      DUF4464; Domain of unknown function (DUF4464)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      39563300..39663735
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394599.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      202468..303707
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)