rbp1.1 retinol binding protein 1, cellular, tandem duplicate 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rbp1.1provided by ZNC
Official Full Name: retinol binding protein 1, cellular, tandem duplicate 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-050421-2
See related: Ensembl:ENSDARG00000018077 AllianceGenome:ZFIN:ZDB-GENE-050421-2
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: rbp1; rbp1b; sb:eu611; zgc:100825
Summary: Predicted to enable fatty acid binding activity. Predicted to be involved in fatty acid transport. Predicted to be active in cytosol and nucleus. Is expressed in gall bladder and ovary. Human ortholog(s) of this gene implicated in multiple myeloma. Orthologous to human RBP1 (retinol binding protein 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 2

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	2	NC_007113.7 (39028337..39036604, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	2	NC_007113.6 (39062698..39070965, complement)

Chromosome 2 - NC_007113.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables fatty acid binding	IBA Inferred from Biological aspect of Ancestor more info
enables lipid binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in fatty acid transport	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytosol	IBA Inferred from Biological aspect of Ancestor more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: retinol-binding protein 1.1

Names: cellular retinol-binding protein type 1b; retinol binding protein 1b, cellular

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_212895.2 → NP_998060.2 retinol-binding protein 1.1

Status: VALIDATED

Source sequence(s)

AL953896

UniProtKB/TrEMBL

A0A8M1PFY3, B0R174

Related

ENSDARP00000105912.2, ENSDART00000129963.3

Conserved Domains (1) summary

pfam00061
Location:5 → 131

Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family