dydc2 DPY30 domain containing 2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: dydc2provided by ZNC
Official Full Name: DPY30 domain containing 2provided by ZNC
Primary source: ZFIN:ZDB-GENE-121030-3
See related: Ensembl:ENSDARG00000101848 AllianceGenome:ZFIN:ZDB-GENE-121030-3
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to be part of Set1C/COMPASS complex. Orthologous to several human genes including DYDC2 (DPY30 domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 12

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (47783814..47793857, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (47718261..47728304, complement)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
part_of Set1C/COMPASS complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: DPY30 domain containing 2

Names: DPY30 domain-containing protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001328010.1 → NP_001314939.1 DPY30 domain containing 2

Status: VALIDATED

Source sequence(s)

CABZ01084340, EH442612, EH468492

UniProtKB/TrEMBL

A0A0G2KNT1, A0A8M1P9R3

Related

ENSDARP00000134033.1, ENSDART00000161294.2

Conserved Domains (2) summary

PHA02664
Location:83 → 204

PHA02664; hypothetical protein; Provisional

pfam05186
Location:1 → 36

Dpy-30; Dpy-30 motif

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007123.7 Reference GRCz11 Primary Assembly

Range

47783814..47793857 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_005172987.5 → XP_005173044.1 DPY30 domain containing 2 isoform X1

UniProtKB/TrEMBL

A0A8M2BK95

Conserved Domains (1) summary

pfam05186
Location:1 → 36

Dpy-30; Dpy-30 motif