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    timmdc1 translocase of inner mitochondrial membrane domain containing 1 [ Danio rerio (zebrafish) ]

    Gene ID: 550526, updated on 2-Nov-2024

    Summary

    Official Symbol
    timmdc1provided by ZNC
    Official Full Name
    translocase of inner mitochondrial membrane domain containing 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050417-369
    See related
    Ensembl:ENSDARG00000053466 AllianceGenome:ZFIN:ZDB-GENE-050417-369
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    im:6892919; zgc:110196
    Summary
    Predicted to be located in mitochondrial membrane. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 31. Orthologous to human TIMMDC1 (translocase of inner mitochondrial membrane domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See timmdc1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (28835506..28861163, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (28031932..28057811, complement)

    Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene general transcription factor II-I repeat domain-containing protein 2-like Neighboring gene zgc:172295 Neighboring gene protein O-glucosyltransferase 1 Neighboring gene PWP2 small subunit processome component

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    complex I assembly factor TIMMDC1, mitochondrial
    Names
    TIMM domain containing-protein 1
    translocase of inner mitochondrial membrane domain-containing protein 1
    transmembrane protein C3orf1 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017828.1NP_001017828.1  complex I assembly factor TIMMDC1, mitochondrial

      See identical proteins and their annotated locations for NP_001017828.1

      Status: PROVISIONAL

      Source sequence(s)
      BC092788
      UniProtKB/Swiss-Prot
      Q568N3
      Related
      ENSDARP00000069984.3, ENSDART00000075502.5
      Conserved Domains (1) summary
      pfam02466
      Location:85214
      Tim17; Tim17/Tim22/Tim23/Pmp24 family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007112.7 Reference GRCz11 Primary Assembly

      Range
      28835506..28861163 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)