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    prrt4b proline rich transmembrane protein 4b [ Danio rerio (zebrafish) ]

    Gene ID: 335883, updated on 2-Nov-2024

    Summary

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    Official Symbol
    prrt4bprovided by ZNC
    Official Full Name
    proline rich transmembrane protein 4bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-7826
    See related
    Ensembl:ENSDARG00000099812 AllianceGenome:ZFIN:ZDB-GENE-030131-7826
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fj35h06; wu:fj35h06; si:dkey-31f5.11
    Summary
    Predicted to be located in membrane. Orthologous to human PRRT4 (proline rich transmembrane protein 4). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See prrt4b in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (18985529..19016126, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (18996556..19027365, complement)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene RAP1B, member of RAS oncogene family Neighboring gene IMP (inosine 5'-monophosphate) dehydrogenase 1b Neighboring gene microRNA 129-1 Neighboring gene leptin b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    proline rich transmembrane protein 4b; proline-rich transmembrane protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      18985529..19016126 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005164785.5 → XP_005164842.1  proline-rich transmembrane protein 4

      UniProtKB/TrEMBL
      A0A0R4IBE2, A0A8M2BBY6
      Related
      ENSDARP00000137656.1, ENSDART00000166160.2
      Conserved Domains (1) summary
      PRK08581
      Location:72 → 404
      PRK08581; N-acetylmuramoyl-L-alanine amidase; Validated
    Nucleotide Protein Strain
    Heading Accession and Version

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