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    sac3d1 SAC3 domain containing 1 [ Danio rerio (zebrafish) ]

    Gene ID: 561420, updated on 9-Dec-2024

    Summary

    Official Symbol
    sac3d1provided by ZNC
    Official Full Name
    SAC3 domain containing 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-4791
    See related
    Ensembl:ENSDARG00000071271 AllianceGenome:ZFIN:ZDB-GENE-030131-4791
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fd60e07; wu:fd60e07; si:zfos-452g4.1
    Summary
    Predicted to be involved in centrosome duplication and spindle assembly. Predicted to be active in centrosome; nucleus; and spindle. Orthologous to human SAC3D1 (SAC3 domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See sac3d1 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (12545173..12612819)
    105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (12610121..12677775)

    Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene sorting nexin family member 21 Neighboring gene HAUS augmin like complex subunit 8 Neighboring gene si:dkey-96f10.1 Neighboring gene uncharacterized LOC110438314 Neighboring gene E3 SUMO-protein ligase ZBED1-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    SAC3 domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001386495.1NP_001373424.1  SAC3 domain-containing protein 1

      Status: VALIDATED

      Source sequence(s)
      CABZ01028825, CU896643
      UniProtKB/TrEMBL
      A0A8M1RRW3
      Related
      ENSDARP00000096054.4, ENSDART00000105283.5
      Conserved Domains (1) summary
      pfam03399
      Location:35325
      SAC3_GANP; SAC3/GANP family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007134.7 Reference GRCz11 Primary Assembly

      Range
      12545173..12612819
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395130.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      262477..270218
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)