LINC01924 long intergenic non-protein coding RNA 1924 [Homo sapiens (human)] - Gene

Summary

Official Symbol: LINC01924provided by HGNC
Official Full Name: long intergenic non-protein coding RNA 1924provided by HGNC
Primary source: HGNC:HGNC:27600
See related: Ensembl:ENSG00000267134 AllianceGenome:HGNC:27600
Gene type: ncRNA
RefSeq status: PREDICTED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression: Low expression observed in reference dataset See more
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Genomic context

See LINC01924 in Genome Data Viewer

Location:: 18q22.1

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	18	NC_000018.10 (64104091..64423601)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	18	NC_060942.1 (64309189..64628915)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	18	NC_000018.9 (61771325..62090836)

Chromosome 18 - NC_000018.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Genome-wide association studies identify CHRNA5/3 and HTR4 in the development of airflow obstruction. EBI GWAS Catalog EBI GWAS CatalogPubMed
Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan. EBI GWAS Catalog EBI GWAS CatalogPubMed

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

SHGC-84088 (e-PCR)
- UniSTS:104733

RH120451 (e-PCR)
- UniSTS:133446

D18S1037 (e-PCR)
- UniSTS:75342

G62399 (e-PCR)
- UniSTS:139350

D18S55 (e-PCR), detects polymorphism
- UniSTS:21099

SHGC-145710 (e-PCR)
- UniSTS:174741

D18S55 (e-PCR), detects polymorphism
- UniSTS:53659

D18S81 (e-PCR)
- UniSTS:147622

SHGC-82575 (e-PCR)
- UniSTS:95664

D18S93 (e-PCR)
- UniSTS:147634

SHGC-78697 (e-PCR)
- UniSTS:100789

RH118550 (e-PCR)
- UniSTS:137947

D18S1259 (e-PCR)
- UniSTS:39662

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.