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    gps2 G protein pathway suppressor 2 [ Danio rerio (zebrafish) ]

    Gene ID: 393948, updated on 2-Nov-2024

    Summary

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    Official Symbol
    gps2provided by ZNC
    Official Full Name
    G protein pathway suppressor 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1176
    See related
    Ensembl:ENSDARG00000035558 AllianceGenome:ZFIN:ZDB-GENE-040426-1176
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:63588
    Summary
    Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of transcription regulator complex. Orthologous to human GPS2 (G protein pathway suppressor 2). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See gps2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (24063034..24074538)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (23559212..23570738)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene CTD nuclear envelope phosphatase 1a Neighboring gene GABA(A) receptor-associated protein a Neighboring gene tumor protein p53 Neighboring gene si:ch211-114c12.5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Stress resilience is established during development and is regulated by complement factors. Swaminathan A, et al. Cell Rep, 2023 Jan 31. PMID 36640352
    2. Comparative genomic and expression analysis of group B1 sox genes in zebrafish indicates their diversification during vertebrate evolution. Okuda Y, et al. Dev Dyn, 2006 Mar. PMID 16408288
    3. Hematopoietic gene expression profile in zebrafish kidney marrow. Song HD, et al. Proc Natl Acad Sci U S A, 2004 Nov 16. PMID 15520368, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC63588

    General protein information

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    Preferred Names
    G protein pathway suppressor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001431107.1 → NP_001418036.1  G protein pathway suppressor 2 isoform a

      Status: VALIDATED

      Source sequence(s)
      AL928875
      UniProtKB/TrEMBL
      A0A8M9QDM7

    2. NM_001431108.1 → NP_001418037.1  G protein pathway suppressor 2 isoform b

      Status: VALIDATED

      Source sequence(s)
      AL928875
      UniProtKB/TrEMBL
      B2GP25, F6P8S4, Q7SZ61
      Related
      ENSDARP00000117918.1, ENSDART00000133355.3

    3. NM_200973.4 → NP_957267.2  G protein pathway suppressor 2 isoform a

      Status: VALIDATED

      Source sequence(s)
      AL928875
      UniProtKB/TrEMBL
      A0A8M9QDM7

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      24063034..24074538
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394575.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      69101..80720
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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