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    zgc:162611 zgc:162611 [ Danio rerio (zebrafish) ]

    Gene ID: 100037365, updated on 2-Nov-2024

    Summary

    Official Symbol
    zgc:162611provided by ZNC
    Official Full Name
    zgc:162611provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070410-87
    See related
    AllianceGenome:ZFIN:ZDB-GENE-070410-87
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Orthologous to several human genes including H3C13 (H3 clustered histone 13); H3C14 (H3 clustered histone 14); and H3C15 (H3 clustered histone 15). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See zgc:162611 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (35097166..35101635, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (34591361..34598203, complement)

    Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene zgc:165555 Neighboring gene histone H2B 1/2-like Neighboring gene kinesin family member 15 Neighboring gene si:dkey-108k21.24 Neighboring gene zgc:194989

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC100037365

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001089517.2NP_001082986.2  uncharacterized protein LOC100037365

      Status: PREDICTED

      Source sequence(s)
      BC139608
      UniProtKB/TrEMBL
      A0A8M1NED1, A4QP11
      Conserved Domains (1) summary
      pfam13843
      Location:98452
      DDE_Tnp_1_7; Transposase IS4

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007136.7 Reference GRCz11 Primary Assembly

      Range
      35097166..35101635 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)