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    tmem131 transmembrane protein 131 [ Danio rerio (zebrafish) ]

    Gene ID: 557719, updated on 14-Nov-2024

    Summary

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    Official Symbol
    tmem131provided by ZNC
    Official Full Name
    transmembrane protein 131provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-130530-662
    See related
    Ensembl:ENSDARG00000056259 AllianceGenome:ZFIN:ZDB-GENE-130530-662
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to be active in membrane. Orthologous to human TMEM131 (transmembrane protein 131). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See tmem131 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    41
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (29313220..29377035, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (29322659..29386486, complement)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene si:ch211-201h21.5 Neighboring gene basic, immunoglobulin-like variable motif containing Neighboring gene actin-like 6A Neighboring gene mitochondrial ribosomal protein L47

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 131
    Names
    zmp:0000000659

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      29313220..29377035 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021477147.2 → XP_021332822.1  transmembrane protein 131 isoform X2

      UniProtKB/TrEMBL
      A0A8M9PMV5, E7F8H2
      Related
      ENSDARP00000073126.3, ENSDART00000078665.6
      Conserved Domains (1) summary
      pfam12371
      Location:87 → 168
      TMEM131_like; Transmembrane protein 131-like

    2. XM_021477146.2 → XP_021332821.1  transmembrane protein 131 isoform X1

      UniProtKB/TrEMBL
      A0A8M9QB17
      Conserved Domains (1) summary
      pfam12371
      Location:87 → 168
      TMEM131_like; Transmembrane protein 131-like

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394647.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      33299..97114 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001923305.7 → XP_001923340.1  transmembrane protein 131 isoform X2

      UniProtKB/TrEMBL
      A0A8M9PMV5, E7F8H2
      Conserved Domains (1) summary
      pfam12371
      Location:87 → 168
      TMEM131_like; Transmembrane protein 131-like

    2. XM_005165961.5 → XP_005166018.1  transmembrane protein 131 isoform X1

      UniProtKB/TrEMBL
      A0A8M9QB17
      Conserved Domains (1) summary
      pfam12371
      Location:87 → 168
      TMEM131_like; Transmembrane protein 131-like
    Nucleotide Protein Strain
    Heading Accession and Version

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