zgc:92161 zgc:92161 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:92161provided by ZNC
Official Full Name: zgc:92161provided by ZNC
Primary source: ZFIN:ZDB-GENE-040912-22
See related: Ensembl:ENSDARG00000101749 AllianceGenome:ZFIN:ZDB-GENE-040912-22
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to enable oxidoreductase activity. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 3

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	3	NC_007114.7 (49043917..49058326)
105	previous assembly	GRCz10 (GCF_000002035.5)	3	NC_007114.6 (44898506..44912915)

Chromosome 3 - NC_007114.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables oxidoreductase activity	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uncharacterized protein LOC447817

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001004556.2 → NP_001004556.2 uncharacterized protein LOC447817

Status: VALIDATED

Source sequence(s)

BX784040, EH459783, EH484407

UniProtKB/TrEMBL

A0A0R4IXF5, A0A8M1N1V4

Related

ENSDARP00000139644.1, ENSDART00000158212.2

Conserved Domains (2) summary

cd05325
Location:9 → 258

carb_red_sniffer_like_SDR_c; carbonyl reductase sniffer-like, classical (c) SDRs

pfam00106
Location:8 → 220

adh_short; short chain dehydrogenase