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    LOC567909 LON peptidase N-terminal domain and RING finger protein 1 [ Danio rerio (zebrafish) ]

    Gene ID: 567909, updated on 12-Sep-2024

    Summary

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    Gene symbol
    LOC567909
    Gene description
    LON peptidase N-terminal domain and RING finger protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
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    Genomic context

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    See LOC567909 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (13700565..13737537)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (13662150..13676604)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene very low-density lipoprotein receptor Neighboring gene novel protein similar to vertebrate pim oncogene family Neighboring gene si:dkey-258f14.3 Neighboring gene uncharacterized LOC101882298 Neighboring gene uncharacterized LOC100536890 Neighboring gene LON peptidase N-terminal domain and ring finger 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    LON peptidase N-terminal domain and RING finger protein 1
    Names
    LON peptidase N-terminal domain and ring finger 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      13700565..13737537
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021478382.2 → XP_021334057.1  LON peptidase N-terminal domain and RING finger protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8M9PR91
      Conserved Domains (4) summary
      COG0457
      Location:177 → 273
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:177 → 202
      TPR; TPR repeat [structural motif]
      cd16513
      Location:108 → 144
      RING1-HC_LONFs; RING finger 1, HC subclass, found in the LON peptidase N-terminal domain and RING finger proteins family
      cl26688
      Location:83 → 192
      DWNN; DWNN domain

    2. XM_068223106.1 → XP_068079207.1  LON peptidase N-terminal domain and RING finger protein 1 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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