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    tmem51a transmembrane protein 51a [ Danio rerio (zebrafish) ]

    Gene ID: 777622, updated on 2-Nov-2024

    Summary

    Official Symbol
    tmem51aprovided by ZNC
    Official Full Name
    transmembrane protein 51aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-061103-481
    See related
    Ensembl:ENSDARG00000068575 AllianceGenome:ZFIN:ZDB-GENE-061103-481
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    im:7148815; wu:fj97e11; zgc:152859
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM51 (transmembrane protein 51). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See tmem51a in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (26701038..26709959, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (26681899..26690820, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl Neighboring gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B Neighboring gene ribosomal protein S11b Neighboring gene kazrin, periplakin interacting protein a Neighboring gene si:ch211-156j16.1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077730.2NP_001071198.2  transmembrane protein 51a

      Status: VALIDATED

      Source sequence(s)
      CR936926
      Related
      ENSDARP00000122445.1, ENSDART00000135215.2

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      26701038..26709959 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394726.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      317393..326664 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)