apmap adipocyte plasma membrane associated protein [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: apmapprovided by ZNC
Official Full Name: adipocyte plasma membrane associated proteinprovided by ZNC
Primary source: ZFIN:ZDB-GENE-020919-1
See related: Ensembl:ENSDARG00000017422 AllianceGenome:ZFIN:ZDB-GENE-020919-1
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: bscv; cb351; zgc:55833; zgc:85628; wu:fb50a03
Summary: Predicted to enable arylesterase activity. Predicted to act upstream of or within biosynthetic process. Predicted to be located in membrane. Is expressed in pronephric duct. Orthologous to human APMAP (adipocyte plasma membrane associated protein). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 13

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	13	NC_007124.7 (6219624..6238930)
105	previous assembly	GRCz10 (GCF_000002035.5)	13	NC_007124.6 (6091164..6110470)

Chromosome 13 - NC_007124.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables arylesterase activity	IBA Inferred from Biological aspect of Ancestor more info
enables strictosidine synthase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within biosynthetic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: adipocyte plasma membrane-associated protein

Names: bscv (C20orf3) homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_212608.1 → NP_997773.1 adipocyte plasma membrane-associated protein

See identical proteins and their annotated locations for NP_997773.1

Status: PROVISIONAL

Source sequence(s)

BC044505

UniProtKB/Swiss-Prot

Q6NWL2, Q803F5

Related

ENSDARP00000004202.5, ENSDART00000025910.7

Conserved Domains (4) summary

COG3386
Location:73 → 319

YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

cd05819
Location:151 → 189

NHL; NHL repeat [structural motif]

cl18310
Location:108 → 281

NHL; NHL repeat unit of beta-propeller proteins

cl22863
Location:200 → 287

Str_synth; Strictosidine synthase